Isolation and Enumeration of Bradyrhizobium Species Dwelling In the Root Nodules of Soybean Plant

Authors

  • Ishaq, Z. Department of Microbiology, Faculty of Life Sciences, Ahmadu Bello University, Zaria, Kaduna State, Nigeria.
  • Machido, D.A. Department of Microbiology, Faculty of Life Sciences, Ahmadu Bello University, Zaria, Kaduna State, Nigeria.
  • Atta, H.I. Department of Microbiology, Faculty of Life Sciences, Ahmadu Bello University, Zaria, Kaduna State, Nigeria.

DOI:

https://doi.org/10.47430/ujmr.2052.003

Keywords:

Soybean, Bradyrhizobium species, Nodulation, Nitrogen fixation

Abstract

Biological Nitrogen fixation is one of the important aspects of organic agriculture gaining considerable attention globally. Information about the number of viable indigenous Bradyrhizobia in soils planted with legumes and their capacity to nodulate is a valuable tool in developing strategies to improve biological nitrogen fixation. Such strategies could potentially lead to increased soybean yields at low cost. This study was conducted to isolate and enumerate Bradyrizobium species dwelling in the root nodule of soybean plant using Bradyrhizobium japonicum selective medium (BJSM). Twenty (20) strains of Bradyrizobium species were isolated from the root nodules of soybean plants harvested from Ahmadu Bello University farm site, located at Bomo district of Sabongari local government area, Kaduna State, Nigeria. This was achieved using the streak method of isolation on BJSM. Ninety percent (18) of these isolates were confirmed as Bradyrizobium species using the plant infection test as they were able to nodulate the roots of soybean plants. The enumeration of the indigenous Bradyrizobium species gave a count ranging from 2.07x105 - 4.0x106 CFU/mL. Thus, the number of Bradyrhizobia obtained in the soil of this study is sufficient to achieve satisfactory results on nodulation and nitrogen fixation.

 

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References

Abaidoo, R.C., Keyser, H.H., Singleton, P.W., Dashiell, K.E. and Sanginga, N. (2007). Population size, distribution, and symbiotic characteristics of indigenous Bradyrhizobium spp. thatnodulate TGx soybean genotypes in Africa. Applied Soil Ecology, 35:57-67.

https://doi.org/10.1016/j.apsoil.2006.05.006

Abdullahi, A.A., Howieson, J., O'Hara, G., Tepolilli, J., Tiwari, R., Vivas-Marfisi, A.I., and Yusuf,A.A. (2013). History of rhizobia inoculants use for grain legumes improvement in Nigeria- the journey so far. PhD studies by N2Africa project and Murdoch University, Western Australia, pp. 1-27

Abubakar, F. and Ado, Y. (2016). Relative efficiency and response of promiscuous soybean to rhizobia inoculant in Savanna region of Nigeria. African Journal of MicrobiologyResearch,10(31):1187- 1193.

https://doi.org/10.5897/AJMR2015.7872

Adekiya, A.O., Kehinde, A.A., Millicent, E.O., Elizabeth, T.A. and Ojo, T.V.A. (2019).Characterization and classification of soils of a toposequence in a derived savannah agroecological zone of Nigeria. The Open Agriculture Journal, 13:44-50.

https://doi.org/10.2174/1874331501913010044

Adesemoye, A., Torbert, H., and Kloepper, J. (2009). Plant growth-promoting rhizobacteria allow reduced application rates of chemical fertilizers. Microbial Ecology, 58:921-929.

https://doi.org/10.1007/s00248-009-9531-y

Atieno, M., Herrmann, L., Okalebo, R. (2012). Efficiency of different formulations of Bradyrhizobium japonicum and effect of co-inoculation of Bacillus subtilis with two different strains of Bradyrhizobium japonicum . World Journal of Microbiology and Biotechnology, 28: 2541-2550

https://doi.org/10.1007/s11274-012-1062-x

Belewu, M.A. and Belewu, K.Y. (2007). Comparative physico-chemical evaluation of tiger-nut, soybean and coconut milk sources. International Journal of Agriculture & Biology, 9(5): 785-787.

Berrada, H and Fikri-Benbrahim, K. (2014). Taxonomy of the rhizobia: Current perspectives. British Microbiology Research Journal, 4(6):616-639.

https://doi.org/10.9734/BMRJ/2014/5635

Bishnoi, U. (2015). PGPR Interaction: An Ecofriendly Approach Promoting the Sustainable Agriculture System. Advances in Botanical Research, 75:0065-2296.

https://doi.org/10.1016/bs.abr.2015.09.006

Chianu, J., Nkonya, E., Mairura, F., Chianu, J. and Akinnifesi, F. (2011). Biological nitrogen fix ation and socioeconomic factors for legume production in sub- Saharan Africa: a review. Agronomy for Sustainable Development, 31 (1):139-154.

https://doi.org/10.1051/agro/2010004

Chibeba, A.M., Kyei-Boahen, S., Guimarães, M.F., Nogueira, M.A., and Hungria, M. (2017). Isolation, characterization and selection of indigenous Bradyrhizobium strains with outstanding symbiotic performance to increase soybean yields in Mozambique. Agriculture, Ecosystems & Environment, 246: 291-305

https://doi.org/10.1016/j.agee.2017.06.017

Dianda, M., Boukar, O., Ibrahim, H. and Muaz, W.A. (2014). Indigenous Bradyrhizobiumand commercial inoculants in growth of soybean [Glycine max (L.) Merr.] in northern Nigeria. n the Proceedings of the 1st International conference on Dryland, p. 65.

Dugje, I.Y., Omoigui, L.O., Ekeleme, F., Bandyopadhyay, R., Kumar, P.L. and Kamara, A.Y. (2009). Farmers' guide to soybean production in northern Nigeria. https://www.researchgate.net/publica tion/262451217_Farmers%27_Guide_to_ Soybean_Prouction_in_Northern_Nigeria

Emmanuel, O., Osei Yaw, A., Bjorn, S. and Mette M.S. (2008). Host range, symbiotic effectiveness and nodulation competitiveness of some indigenous cowpea Bradyrhizobia isolates from the transitional savanna zone of Ghana. African Journal of Biotechnology, 7(8): 988-996.

Gyogluu, C., Sanjay, K.J., Stephen, K. and Felix, D.D. (2018) Identification and distribution of microsymbionts associated with soybean nodulation in Mozambican soils. Systematic and Applied Microbiology, 41(5): 506-515.

https://doi.org/10.1016/j.syapm.2018.05.003

Hungria, M. and Mendes, I.C. (2015). Nitrogen Fixation with Soybean: The Perfect Symbiosis? In Biological Nitrogen Fixation, Eds., de Bruijn, F.J., EmbrapaSoja, Londrina: John Wiley & Sons, Inc., p. 1009

https://doi.org/10.1002/9781119053095.ch99

Howienson, J.G and Dilworth, M.J. (2016). Working with rhizobia. Australian Centre for International Agricultural Research: Canberra. P. 91.

Ibanez, F., Angelini, J., Taurian, T., Tonelli, M.L. and Fabra, A. (2009). Endophytic occupation of peanut root nodules by opportunistic Gammaproteobacteria. Systematic and Applied Microbiology, 32(1):49-55.

https://doi.org/10.1016/j.syapm.2008.10.001

Imrana, R. (2017). Isolation and molecular characterization of indigenous bradyrhizobium species and assessing their capability to nodulate and fix nitrogen in soybean (Glycine max). Thesis, Ahmadu Bello University Zaria, Kaduna State, Nigeria.

International Institute of Tropical Agriculture (IITA) (2009). Soybean (Glycine max.).New York http://www.iita.org.soybean

Kim, J. and Rees, D.C. (1994). Nitrogenase and biological nitrogen fixation. Biochemistry, 33:389 397.

https://doi.org/10.1021/bi00168a001

Kinugasa, T., Sato, T., Oikawa, S. and Hirose,T. (2012). Demand and supply of N in seed production of soybean (Glycine max) at different N fertilization levels after flowering. Journal of Plant Research, 125: 275-281. Doi:10.1007/s10265-011-0439-5

https://doi.org/10.1007/s10265-011-0439-5

Machido, D.A (2010). Effects of fungicides on population size and activities of nitrifying and nitrogen fixing bacteria under screen house conditions. Dissertation, Ahmadu Bello University Zaria, Kaduna State, Nigeria.

Machido, D.A., Olufajo, O.O., Yakubu, S.E. and Yusufu, S.S. (2011). Enhancing the contribution of the legumes to the N fertility of soils of the semi-arid zone of Nigeria. African Journal of Biotechnology 10(10): 1848-1853.

Mohammadi, K., Yousef, S., Gholamreza, H., Shiva, K. and Mohammad, M. (2012). Effective factors on biological nitrogen fixation. African Journal of Agricultural Research, 7(12): 1782-1788.

https://doi.org/10.5897/AJARX11.034

Ojo, A., Michael, O.D., Olajire, F. and Olubukola, B. (2015). Variations in infectivity of indigenous rhizobial isolates of some soils in the rainforest zone of Nigeria. Archives of Agronomy and Soil Science, 61(3):371-380.

https://doi.org/10.1080/03650340.2014.933811

Okalebo, J.R., Gathua, K.W. and Woomer, P. (2002). Laboratory methods of soil and plant analysis: A working manual. Nairobi: TSBF-CIAT and SACRED Africa, Kenya.

Omotayo, A.M., Olowe, V.I.O., Fabusoro, E., Babajide, J.M. Ojo, D.K. and D.A. Adegbite. (2007). Commercial demand for soybean in Nigeria: Making Nigerian agricultural markets work for the Poor. Prop Com Monograph Series 29. Agricultural Media Resources and ExtensionCentre (AMREC). Abuja: Department for International Development.

Pawar, D.R. and Shah, K.M. (2009). Laboratory testing procedure for soil and water sampleanalysis. Government of Maharashtra, water resources department, directorate of irrigation research and development, Pune.

Phanuel, Y.K., Victor, O. and Johnson, O. (2015). Effect of Bradyrhizobium japonicum population on nodulation, nitrogen fixation and dryMatter yield on soybean (Glycine maxL Merrill) in some Ghanaian Soils. Journal of Natural Sciences Research, 5(20):2015

Pongdet, P., Teerana, G., Kamonluck, T., Takashi, O., Ryo, S., Achara, N. and Panlada, T. (2015). Preferential Association of Endophytic Bradyrhizobia with different rice cultivars and its implications for rice endophyte evolution. Applied and Environmental Microbiology, 81(9):3049-3061. DOI: 10.1128/AEM.04253-14

https://doi.org/10.1128/AEM.04253-14

Rodrigues-Navarro, D.N., Oliver, I.M., Contreras, M.A. and Ruiz-Sainz, J.E. (2011). Soybean interactions with soil microbes, agronomical and molecular aspects. Agronomy for Sustainable Development, 31: 173-190.

https://doi.org/10.1051/agro/2010023

Rouws, L.F.M., Leite, J., de, Matos, G.F., Zilli, J.E., Coelho, M.R.R., Xavier, G.R. and Fischer, D. (2014), Bradyrhizobium spp. isolates from sugarcane. Environmental Microbiology Reports, 6: 354-363. doi:10.1111/1758-2229.12122

https://doi.org/10.1111/1758-2229.12122

Salvagiotti, F., Cassman, K.G., Specht, J.E., Walters, D.T., Weiss, A. and Dobermann, A. (2008). Nitrogen uptake, fixation and response to fertilizer N in soybeans: A review. Field Crops Research , 8: 1-13.

https://doi.org/10.1016/j.fcr.2008.03.001

Santos, M.S., Nogueira, M.A. and Hungria, M. (2019). Microbial inoculants: reviewing the past, discussing the present and previewing an outstanding future for the use of beneficial bacteria in agriculture. AMB Express, 9: 205. https://doi.org/10.1186/s13568-019- 0932-0

https://doi.org/10.1186/s13568-019-0932-0

Saturno, D.F., Paula, C., Pedro da Silva, M., Arnold, B., Maria, C.N., Mariangela, H. and Marco, A. N. (2017): Mineral nitrogen impairs the biological nitrogen fixation in soybean of determinate and indeterminate Growth Types. Journal of Plant Nutrition, DOI: 10.1080/01904167.2017.1310890

https://doi.org/10.1080/01904167.2017.1310890

Sharu, M., Yakubu, M., Noma, S.S. and Tsafe,A.I. (2013). Characterization and classification of soils on an agricultural landscape in Dingyadi district, Sokoto State, Nigeria. Nigerian Journal of Basic and Applied Sciences, 21 (2):137-147.

https://doi.org/10.4314/njbas.v21i2.9

Shehu, B.M., Jibrin, J.M., Roel, M., Alpha, Y.K. and Jairos, R. (2018). Quantifying variability in maize yield response to nutrient applications in the northern Nigerian Savanna. Agronomy, 8(18): 17-23.

https://doi.org/10.3390/agronomy8020018

Tong, Z. and Sadowsky, M.J. (1994). A selective medium for the isolation and quantification of Bradyrhizobium japonicum and Bradyrhizobium elkanii strains from soils and inoculants. Applied and Environmental Microbiology, 60(2):581-586

https://doi.org/10.1128/aem.60.2.581-586.1994

Woomer, P.L., Karanja, N., Kisamuli, S.M., Murwira, M. and Bala, A. (2011). A revised manual for rhizobium methods and standard protocols, p.69. www.N2Africa.org.

Umeri, C., Onyemekonwu, R.C. and Moseri, H. (2017). Analysis of physical and chemical properties of some selected soils of rain forest zones of Delta State, Nigeria. Agricultural Research and Technology Open Access Journal, 5(4): 555668.

https://doi.org/10.19080/ARTOAJ.2017.05.555668

United States Department of Agriculture (1993). Soil conservation service. Soil survey manual,p.219

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Published

30-12-2020

How to Cite

Ishaq, Z., Machido, D.A., & Atta, H.I. (2020). Isolation and Enumeration of Bradyrhizobium Species Dwelling In the Root Nodules of Soybean Plant. UMYU Journal of Microbiology Research (UJMR), 5(2), 17–25. https://doi.org/10.47430/ujmr.2052.003

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